Use:
tr -d "\r" < file
Take a look here for examples using sed:
# In a Unix environment: convert DOS newlines (CR/LF) to Unix format.
sed 's/.$//' # Assumes that all lines end with CR/LF
sed 's/^M$//' # In Bash/tcsh, press Ctrl-V then Ctrl-M
sed 's/\x0D$//' # Works on ssed, gsed 3.02.80 or higher
# In a Unix environment: convert Unix newlines (LF) to DOS format.
sed "s/$/`echo -e \\\r`/" # Command line under ksh
sed 's/$'"/`echo \\\r`/" # Command line under bash
sed "s/$/`echo \\\r`/" # Command line under zsh
sed 's/$/\r/' # gsed 3.02.80 or higher
Use sed -i for in-place conversion, e.g., sed -i 's/..../' file.